Research workbench
AlphaFold monomer V2.0 prediction for UV excision repair protein RAD23 (P32628)
Analyse AlphaFold monomer V2.0 prediction for UV excision repair protein RAD23 (P32628) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P32628
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- UV excision repair protein RAD23
- UniProt
- P32628
- Pockets
- 1 · best druggability 0.30
Structure
1 distinct chain · 35% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UV excision repair protein RAD23 | protein | 398 | 35% helix, 7% strand | P32628 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.30 | 0.73 | 14 | empty |
Compared structures
- 2NBU · Solution structure of the RAD23 ubiquitin-like (ubl) domain · an experimental structure of the same protein · chain A against A, TM-score 0.19
- 2NBU · Solution structure of the Rad23 ubiquitin-like (UBL) domain · an experimental structure of the same protein · chain A against A, TM-score 0.19
- 2NBW · Solution structure of the Rpn1 T1 site with the Rad23 UBL domain · an experimental structure of the same protein · chain A against B, TM-score 0.19
- 2NBW · Solution structure of the RPN1 T1 site with the RAD23 ubl domain · an experimental structure of the same protein · chain A against B, TM-score 0.19
- 3M62 · Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23 · an experimental structure of the same protein · chain A against B, TM-score 0.18
- 3M62 · Crystal structure of UFD2 in complex with the ubiquitin-like (ubl) domain of RAD23 · an experimental structure of the same protein · chain A against B, TM-score 0.18
- 2QSF · Crystal structure of the Rad4-Rad23 complex · an experimental structure of the same protein · chain A against X, TM-score 0.14
- 2QSF · Crystal structure of the RAD4-RAD23 complex · an experimental structure of the same protein · chain A against X, TM-score 0.14
- 6UG1 · Sequence impact in DNA duplex opening by the RAD4/XPC nucleotide excision repair complex · an experimental structure of the same protein · chain A against X, TM-score 0.14
- 6UG1 · Sequence impact in DNA duplex opening by the Rad4/XPC nucleotide excision repair complex · an experimental structure of the same protein · chain A against X, TM-score 0.14
- 1X3W · Structure of a peptide:N-glycanase-Rad23 complex · an experimental structure of the same protein · chain A against B, TM-score 0.14
- 1X3W · Structure of a PEPTIDE:N-glycanase-RAD23 complex · an experimental structure of the same protein · chain A against B, TM-score 0.14
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32628
- Elsewhere: UniProt P32628 · AlphaFold DB P32628
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