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AlphaFold monomer V2.0 prediction for RAS-related protein rab-3C (Q96E17)

Analyse AlphaFold monomer V2.0 prediction for RAS-related protein rab-3C (Q96E17) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q96E17
Type: protein
Length: 227 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
Molecule: RAS-related protein rab-3C
UniProt: Q96E17
Pockets: 2 · best druggability 0.57

Structure

1 distinct chain · 36% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RAS-related protein rab-3C	protein	227	36% helix, 22% strand	Q96E17

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	163	0.57	0.81	30	empty
2	63	0.31	0.75	11	empty

Compared structures

6Y7G · Structure of the human RAB3C in complex with GDP · an experimental structure of the same protein · chain A against B, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96E17
Elsewhere: UniProt Q96E17 · AlphaFold DB Q96E17

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