Research workbench
AlphaFold monomer V2.0 prediction for ribose 1,5-bisphosphate isomerase (O57947)
Analyse AlphaFold monomer V2.0 prediction for ribose 1,5-bisphosphate isomerase (O57947) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O57947
- Type
- protein
- Length
- 324 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x55A5482eFDAe093Ac303f79Fd15c793158Fd59e7
- Molecule
- Ribose 1,5-bisphosphate isomerase
- UniProt
- O57947
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 52% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribose 1,5-bisphosphate isomerase | protein | 324 | 52% helix, 13% strand | O57947 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 184 | 0.72 | 0.89 | 29 | empty |
| 2 | 171 | 0.54 | 0.79 | 30 | empty |
| 3 | 57 | 0.31 | 0.76 | 14 | empty |
Compared structures
- 5YG7 · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YG7 · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YFT · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YFT · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YFW · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YFW · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YG9 · Crystal structure of ribose-1,5-bisphosphate isomerase mutant C135S from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YG9 · Crystal structure of ribose-1,5-bisphosphate isomerase mutant C135S from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YGA · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from Pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5YGA · Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O57947
- Elsewhere: UniProt O57947 · AlphaFold DB O57947
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