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AlphaFold monomer V2.0 prediction for amidophosphoribosyltransferase (P0AG16)

Analyse AlphaFold monomer V2.0 prediction for amidophosphoribosyltransferase (P0AG16) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P0AG16
Type: protein
Length: 505 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xfD2aa30896c43ba48ACc736586610789048c2c7a
Molecule: Amidophosphoribosyltransferase
UniProt: P0AG16
Pockets: 3 · best druggability 0.80

Structure

1 distinct chain · 36% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Amidophosphoribosyltransferase	protein	505	36% helix, 23% strand	P0AG16

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1109	0.80	0.81	77	empty
2	357	0.59	0.77	40	empty
3	86	0.35	0.75	20	empty

Compared structures

6CZF · The structure of E. COLI purf in complex with ppgpp-mg · an experimental structure of the same protein · chain A against D, TM-score 0.95
6OTT · Structure of purf in complex with ppapp · an experimental structure of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0AG16
Elsewhere: UniProt P0AG16 · AlphaFold DB P0AG16

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