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AlphaFold monomer V2.0 prediction for DNA replication complex gins protein PSF1 (Q12488)

Analyse AlphaFold monomer V2.0 prediction for DNA replication complex gins protein PSF1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q12488
Type
protein
Length
208 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
Molecule
DNA replication complex gins protein PSF1
UniProt
Q12488
Pockets
1 · best druggability 0.50

Structure

1 distinct chain · 59% helix, 11% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA replication complex gins protein PSF1protein20859% helix, 11% strandQ12488

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12330.500.7545empty

Compared structures

  • 8XGC · Structure of yeast replisome associated with FACT and histone hexamer, Composite map · an experimental structure of the same protein · chain A against A, TM-score 0.89
  • 8P63 · S. cerevisiae consensus-sCMGE on ssDNA after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
  • 8P62 · S. cerevisiae ssDNA-sCMGE after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
  • 3JC6 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 3JC6 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 3JC7 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 3JC7 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 3JC5 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 3JC5 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 8P5E · S. cerevisiae nexus-sCMGE after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
  • 5U8T · Structure of eukaryotic cmg helicase at a replication fork and implications · an experimental structure of the same protein · chain A against A, TM-score 0.88
  • 5U8T · Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications · an experimental structure of the same protein · chain A against A, TM-score 0.88

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