Research workbench
AlphaFold monomer V2.0 prediction for DNA replication complex gins protein PSF1 (Q12488)
Analyse AlphaFold monomer V2.0 prediction for DNA replication complex gins protein PSF1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12488
- Type
- protein
- Length
- 208 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- DNA replication complex gins protein PSF1
- UniProt
- Q12488
- Pockets
- 1 · best druggability 0.50
Structure
1 distinct chain · 59% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA replication complex gins protein PSF1 | protein | 208 | 59% helix, 11% strand | Q12488 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 233 | 0.50 | 0.75 | 45 | empty |
Compared structures
- 8XGC · Structure of yeast replisome associated with FACT and histone hexamer, Composite map · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 8P63 · S. cerevisiae consensus-sCMGE on ssDNA after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
- 8P62 · S. cerevisiae ssDNA-sCMGE after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
- 3JC6 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 3JC6 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 3JC7 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 3JC7 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 3JC5 · Structure of the eukaryotic replicative cmg helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 3JC5 · Structure of the eukaryotic replicative CMG helicase and pumpjack motion · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 8P5E · S. cerevisiae nexus-sCMGE after DNA replication initiation · an experimental structure of the same protein · chain A against H, TM-score 0.88
- 5U8T · Structure of eukaryotic cmg helicase at a replication fork and implications · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 5U8T · Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications · an experimental structure of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12488
- Elsewhere: UniProt Q12488 · AlphaFold DB Q12488
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