Research workbench
AlphaFold monomer V2.0 prediction for 26S proteasome non-ATPase regulatory subunit 14 (O00487)
Analyse AlphaFold monomer V2.0 prediction for 26S proteasome non-ATPase regulatory… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O00487
- Type
- protein
- Length
- 310 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- 26S proteasome non-ATPase regulatory subunit 14
- UniProt
- O00487
- Pockets
- 3 · best druggability 0.51
Structure
1 distinct chain · 45% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 26S proteasome non-ATPase regulatory subunit 14 | protein | 310 | 45% helix, 18% strand | O00487 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 207 | 0.51 | 0.76 | 33 | empty |
| 2 | 54 | 0.39 | 0.81 | 15 | empty |
| 3 | 81 | 0.34 | 0.75 | 15 | empty |
Compared structures
- 8USB · Non-substrate-engaged human 26S proteasome with Nub1/FAT10 bound to Rpn1 · an experimental structure of the same protein · chain A against c, TM-score 0.87
- 9E8H · Human proteasome in resting state conformation bound to TXNL1 in backward conformation · an experimental structure of the same protein · chain A against c, TM-score 0.87
- 9E8I · Human proteasome in resting state conformation bound to TXNL1 in Forward conformation · an experimental structure of the same protein · chain A against c, TM-score 0.87
- 7W39 · Structure of USP14-bound human 26S proteasome in state EA2.1_UBL · an experimental structure of the same protein · chain A against c, TM-score 0.86
- 7W38 · Structure of USP14-bound human 26S proteasome in state EA2.0_UBL · an experimental structure of the same protein · chain A against c, TM-score 0.86
- 6MSE · Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome · an experimental structure of the same protein · chain A against c, TM-score 0.86
- 8JTI · Cryo-EM structure of human 26S RP (Eb state) bound to K11/K48-branched ubiquitin (Ub)… · an experimental structure of the same protein · chain A against c, TM-score 0.86
- 7QXW · Proteasome-ZFAND5 Complex Z+D state · an experimental structure of the same protein · chain A against c, TM-score 0.86
- 6MSD · Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome · an experimental structure of the same protein · chain A against c, TM-score 0.85
- 6WJD · SA-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3… · an experimental structure of the same protein · chain A against c, TM-score 0.85
- 7QXU · Proteasome-ZFAND5 Complex Z+C state · an experimental structure of the same protein · chain A against c, TM-score 0.85
- 7QXP · Proteasome-ZFAND5 Complex Z+B state · an experimental structure of the same protein · chain A against c, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00487
- Elsewhere: UniProt O00487 · AlphaFold DB O00487
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