Research workbench
AlphaFold monomer V2.0 prediction for proteasome subunit beta (A5U4D6)
Analyse AlphaFold monomer V2.0 prediction for proteasome subunit beta (A5U4D6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5U4D6
- Type
- protein
- Length
- 291 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Proteasome subunit beta
- UniProt
- A5U4D6
- Pockets
- 2 · best druggability 0.50
Structure
1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteasome subunit beta | protein | 291 | 37% helix, 23% strand | A5U4D6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.50 | 0.76 | 33 | empty |
| 2 | 55 | 0.40 | 0.81 | 17 | empty |
Compared structures
- 6WNK · Macrocyclic peptides TDI5575 that selectively inhibit the mycobacterium tuberculosis… · an experimental structure of the same protein · chain A against H, TM-score 0.77
- 5TRS · Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide… · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 5TRY · Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide… · an experimental structure of the same protein · chain A against a, TM-score 0.76
- 5THO · Crystal Structure of Mycobacterium Tuberculosis Proteasome in complex with N,C-capped… · an experimental structure of the same protein · chain A against a, TM-score 0.76
- 5TS0 · Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide… · an experimental structure of the same protein · chain A against L, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5U4D6
- Elsewhere: UniProt A5U4D6 · AlphaFold DB A5U4D6
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