Research workbench
AlphaFold monomer V2.0 prediction for proteasome subunit alpha type-3 (P25788)
Analyse AlphaFold monomer V2.0 prediction for proteasome subunit alpha type-3 (P25788) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P25788
- Type
- protein
- Length
- 255 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- Proteasome subunit alpha type-3
- UniProt
- P25788
- Pockets
- 1 · best druggability 0.42
Structure
1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteasome subunit alpha type-3 | protein | 255 | 38% helix, 24% strand | P25788 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.42 | 0.77 | 18 | empty |
Compared structures
- 4R3O · Human Constitutive 20S Proteasome · an experimental structure of the same protein · chain A against G, TM-score 0.95
- 4R3O · Human constitutive 20S proteasome · an experimental structure of the same protein · chain A against G, TM-score 0.95
- 4R67 · Human constitutive 20S proteasome in complex with carfilzomib · an experimental structure of the same protein · chain A against G, TM-score 0.95
- 4R67 · Human constitutive 20S proteasome in complex with carfilzomib · an experimental structure of the same protein · chain A against G, TM-score 0.95
- 6E5B · Human immunoproteasome 20S particle in complex with compound 1 · an experimental structure of the same protein · chain A against F, TM-score 0.95
- 6E5B · Human Immunoproteasome 20S particle in complex with compound 1 · an experimental structure of the same protein · chain A against F, TM-score 0.95
- 6KWY · Human PA200-20S complex · an experimental structure of the same protein · chain A against F, TM-score 0.95
- 6KWY · human PA200-20S complex · an experimental structure of the same protein · chain A against F, TM-score 0.95
- 5GJR · An atomic structure of the human 26S proteasome · an experimental structure of the same protein · chain A against X, TM-score 0.94
- 8CVS · Human PA200-20S proteasome with MG-132 · an experimental structure of the same protein · chain A against F, TM-score 0.94
- 7NAQ · Human PA200-20S proteasome complex · an experimental structure of the same protein · chain A against F, TM-score 0.94
- 7B12 · Human immunoproteasome 20S particle in complex with [2-(3… · an experimental structure of the same protein · chain A against U, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25788
- Elsewhere: UniProt P25788 · AlphaFold DB P25788
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