Research workbench
AlphaFold monomer V2.0 prediction for polyribonucleotide nucleotidyltransferase (P05055)
Analyse AlphaFold monomer V2.0 prediction for polyribonucleotide nucleotidyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P05055
- Type
- protein
- Length
- 711 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbe76286E675B2761093E18e8e83091B43cd8ACCf
- Molecule
- Polyribonucleotide nucleotidyltransferase
- UniProt
- P05055
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 35% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyribonucleotide nucleotidyltransferase | protein | 711 | 35% helix, 29% strand | P05055 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 901 | 0.76 | 0.79 | 76 | empty |
| 2 | 682 | 0.65 | 0.75 | 56 | empty |
| 3 | 141 | 0.49 | 0.78 | 24 | empty |
| 4 | 59 | 0.35 | 0.78 | 14 | empty |
| 5 | 56 | 0.28 | 0.74 | 12 | empty |
Compared structures
- 7OGL · A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.… · an experimental structure of the same protein · chain A against C, TM-score 0.90
- 7OGK · A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.… · an experimental structure of the same protein · chain A against B, TM-score 0.90
- 7OGM · A cooperative pnpase-hfq-RNA carrier complex facilitates bacterial riboregulation.… · an experimental structure of the same protein · chain A against N, TM-score 0.90
- 7OGM · A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.… · an experimental structure of the same protein · chain A against N, TM-score 0.90
- 7OGK · A cooperative pnpase-hfq-RNA carrier complex facilitates bacterial riboregulation.… · an experimental structure of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05055
- Elsewhere: UniProt P05055 · AlphaFold DB P05055
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.