UniProt P05055
Polyribonucleotide nucleotidyltransferase (P05055)
Polyribonucleotide nucleotidyltransferase (UniProt P05055), EC 2.7.7.8: 9 experimental structures and 1 predicted model on GenesisL1, 37 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P05055
- Protein
- Polyribonucleotide nucleotidyltransferase
- EC
- 2.7.7.8
- Experimental structures
- 9
- Predicted models
- 1
- Pockets
- 37 · 3 records with a druggable one
Structures
10 records of P05055 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1SRO | S1 RNA binding domain, NMR, 20 structures | solution nmr | A | — | — |
| 1SRO | S1 RNA binding domain, NMR, 20 structures | solution nmr | A | — | — |
| 3H1C | Crystal structure of Polynucleotide Phosphorylase (PNPase) core bound to RNase E and Tungstate | x-ray diffraction | A, B, C, G, I, K, M, O, R, T, V, X | — | — |
| 3H1C | Crystal structure of polynucleotide phosphorylase (pnpase) core bound to RNase E and tungstate | x-ray diffraction | A, B, C, G, I, K, M, O, R, T, V, X | — | — |
| 7OGK | A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.… | electron microscopy | A, B, C | — | 20 (best 0.86) |
| 7OGK | A cooperative pnpase-hfq-RNA carrier complex facilitates bacterial riboregulation.… | electron microscopy | A, B, C | — | — |
| 7OGL | A cooperative pnpase-hfq-RNA carrier complex facilitates bacterial riboregulation. apo-pnpase | electron microscopy | A, B, C | — | — |
| 7OGM | A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.… | electron microscopy | L, N, O | — | 12 (best 0.82) |
| 7OGM | A cooperative pnpase-hfq-RNA carrier complex facilitates bacterial riboregulation.… | electron microscopy | L, N, O | — | — |
| P05055 | AlphaFold monomer V2.0 prediction for polyribonucleotide nucleotidyltransferase (P05055) | predicted | A | — | 5 (best 0.76) |
Experiment against prediction
- 3H1C chain A against the predicted model P05055: TM-score 0.99, RMSD 0.75 Å
- 3H1C chain A against the predicted model P05055: TM-score 0.99, RMSD 0.75 Å
- 3H1C chain G against the predicted model P05055: TM-score 0.99, RMSD 0.76 Å
- 3H1C chain G against the predicted model P05055: TM-score 0.99, RMSD 0.76 Å
- 7OGM chain N against the predicted model P05055: TM-score 0.92, RMSD 2.77 Å
- 7OGM chain N against the predicted model P05055: TM-score 0.92, RMSD 2.77 Å
- 7OGK chain B against the predicted model P05055: TM-score 0.92, RMSD 2.82 Å
- 7OGK chain C against the predicted model P05055: TM-score 0.91, RMSD 2.95 Å
- 7OGM chain O against the predicted model P05055: TM-score 0.90, RMSD 3.36 Å
- 7OGM chain O against the predicted model P05055: TM-score 0.90, RMSD 3.36 Å
Elsewhere
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