Research workbench
AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase (Q6XQN6)
Analyse AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6XQN6
- Type
- protein
- Length
- 538 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Nicotinate phosphoribosyltransferase
- UniProt
- Q6XQN6
- Pockets
- 7 · best druggability 0.60
Structure
1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nicotinate phosphoribosyltransferase | protein | 538 | 42% helix, 18% strand | Q6XQN6 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 304 | 0.60 | 0.78 | 34 | empty |
| 2 | 264 | 0.54 | 0.76 | 37 | empty |
| 3 | 160 | 0.54 | 0.80 | 28 | empty |
| 4 | 138 | 0.48 | 0.78 | 25 | empty |
| 5 | 57 | 0.31 | 0.76 | 15 | empty |
Compared structures
- 4YUB · Crystal structure of human Nicotinic Acid Phosphoribosyltransferase · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 4YUB · Crystal structure of human nicotinic acid phosphoribosyltransferase · an experimental structure of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6XQN6
- Elsewhere: UniProt Q6XQN6 · AlphaFold DB Q6XQN6
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