Research workbench
AlphaFold monomer V2.0 prediction for C-phycocyanin alpha subunit (P72509)
Analyse AlphaFold monomer V2.0 prediction for C-phycocyanin alpha subunit (P72509) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P72509
- Type
- protein
- Length
- 162 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- C-phycocyanin alpha subunit
- UniProt
- P72509
- Pockets
- 1 · best druggability 0.61
Structure
1 distinct chain · 78% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-phycocyanin alpha subunit | protein | 162 | 78% helix, 0% strand | P72509 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 172 | 0.61 | 0.83 | 28 | empty |
Compared structures
- 1GH0 · Crystal structure of C-phycocyanin from spirulina platensis · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1GH0 · Crystal structure of C-phycocyanin from spirulina platensis · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1HA7 · Structure of a light-harvesting phycobiliprotein, C-phycocyanin from spirulina platensis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1HA7 · Structure of a light-harvesting phycobiliprotein, C-phycocyanin from spirulina platensis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2UUM · Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2UUM · Crystal structure of C-phycocyanin from phormidium, lyngbya spp. (marine) and spirulina… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P72509
- Elsewhere: UniProt P72509 · AlphaFold DB P72509
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