Research workbench
AlphaFold monomer V2.0 prediction for polygalacturonase (Q07181)
Analyse AlphaFold monomer V2.0 prediction for polygalacturonase (Q07181) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q07181
- Type
- protein
- Length
- 373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Polygalacturonase
- UniProt
- Q07181
- Pockets
- 1 · best druggability 0.44
Structure
1 distinct chain · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polygalacturonase | protein | 373 | 5% helix, 48% strand | Q07181 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 206 | 0.44 | 0.74 | 32 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1HG8 · Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 1HG8 · Endopolygalacturonase from the phytopathogenic fungus fusarium moniliforme · an experimental structure of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07181
- Elsewhere: UniProt Q07181 · AlphaFold DB Q07181
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