Research workbench
AlphaFold monomer V2.0 prediction for prolyl 3-hydroxylase 1 (Q32P28)
Analyse AlphaFold monomer V2.0 prediction for prolyl 3-hydroxylase 1 (Q32P28) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q32P28
- Type
- protein
- Length
- 736 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x62370fb22BC546fb24408ec2dE2076b4fd030239
- Molecule
- Prolyl 3-hydroxylase 1
- UniProt
- Q32P28
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prolyl 3-hydroxylase 1 | protein | 736 | 55% helix, 11% strand | Q32P28 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 989 | 0.72 | 0.76 | 76 | empty |
| 2 | 234 | 0.65 | 0.83 | 33 | empty |
| 3 | 141 | 0.45 | 0.77 | 19 | empty |
| 4 | 131 | 0.41 | 0.75 | 24 | empty |
| 5 | 121 | 0.37 | 0.73 | 19 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Compared structures
- 8K0F · Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its apo… · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 8K0M · Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to… · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 8KC9 · Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to… · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 8K0E · Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 8K17 · Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to… · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 8K0I · Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its… · an experimental structure of the same protein · chain A against A, TM-score 0.51
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32P28
- Elsewhere: UniProt Q32P28 · AlphaFold DB Q32P28
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