Research workbench
AlphaFold monomer V2.0 prediction for phd finger protein 20-like protein 1 (A8MW92)
Analyse AlphaFold monomer V2.0 prediction for phd finger protein 20-like protein 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8MW92
- Type
- protein
- Length
- 1,017 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Phd finger protein 20-like protein 1
- UniProt
- A8MW92
- Pockets
- 4 · best druggability 0.45
Structure
1 distinct chain · 18% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phd finger protein 20-like protein 1 | protein | 1017 | 18% helix, 6% strand | A8MW92 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.45 | 0.76 | 19 | empty |
| 2 | 181 | 0.43 | 0.73 | 19 | empty |
| 3 | 79 | 0.39 | 0.78 | 16 | empty |
| 4 | 62 | 0.29 | 0.73 | 11 | empty |
Compared structures
- 6L10 · PHF20L1 TUDOR1 - mes · an experimental structure of the same protein · chain A against A, TM-score 0.07
- 6L1P · Crystal structure of PHF20L1 in complex with hit 1 · an experimental structure of the same protein · chain A against C, TM-score 0.07
- 6L0X · The First Tudor Domain of PHF20L1 · an experimental structure of the same protein · chain A against B, TM-score 0.07
- 6L0X · The first tudor domain of PHF20L1 · an experimental structure of the same protein · chain A against B, TM-score 0.07
- 6L1C · Crystal Structure Of of PHF20L1 Tudor1 Y24L mutant · an experimental structure of the same protein · chain A against A, TM-score 0.07
- 6L1C · Crystal structure of of PHF20L1 TUDOR1 Y24L mutant · an experimental structure of the same protein · chain A against A, TM-score 0.07
- 6L1I · Crystal structure of of PHF20L1 TUDOR1 Y24W/Y29W mutant · an experimental structure of the same protein · chain A against B, TM-score 0.07
- 6L1I · Crystal Structure Of of PHF20L1 Tudor1 Y24W/Y29W mutant · an experimental structure of the same protein · chain A against B, TM-score 0.07
- 6L1F · Crystal structure of PHF20L1 TUDOR1 in complex with K142ME1 DNMT1 · an experimental structure of the same protein · chain A against B, TM-score 0.07
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8MW92
- Elsewhere: UniProt A8MW92 · AlphaFold DB A8MW92
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