Research workbench
AlphaFold monomer V2.0 prediction for mu-type opioid receptor (P42866)
Analyse AlphaFold monomer V2.0 prediction for mu-type opioid receptor (P42866) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P42866
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Mu-type opioid receptor
- UniProt
- P42866
- Pockets
- 2 · best druggability 0.77
Structure
1 distinct chain · 70% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mu-type opioid receptor | protein | 398 | 70% helix, 3% strand | P42866 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 912 | 0.77 | 0.80 | 50 | empty |
| 2 | 119 | 0.42 | 0.76 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5C1M · Crystal structure of active mu-opioid receptor bound to the agonist BU72 · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 5C1M · Crystal structure of active mu-opioid receptor bound to the agonist BU72 · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 7U2L · C5GUANO-uor-gi-SCFV16 · an experimental structure of the same protein · chain A against D, TM-score 0.69
- 9BQJ · RO76 bound muOR-Gi1-scFv16 complex structure · an experimental structure of the same protein · chain A against D, TM-score 0.69
- 7SCG · FH210 bound Mu Opioid Receptor-Gi Protein Complex · an experimental structure of the same protein · chain A against D, TM-score 0.68
- 7SCG · FH210 bound mu opioid receptor-gi protein complex · an experimental structure of the same protein · chain A against D, TM-score 0.68
- 7SBF · PZM21 bound mu opioid receptor-gi protein complex · an experimental structure of the same protein · chain A against R, TM-score 0.68
- 7U2K · C6-guano bound Mu Opioid Receptor-Gi Protein Complex · an experimental structure of the same protein · chain A against D, TM-score 0.68
- 6DDF · Mu opioid receptor-gi protein complex · an experimental structure of the same protein · chain A against R, TM-score 0.68
- 6DDF · Mu Opioid Receptor-Gi Protein Complex · an experimental structure of the same protein · chain A against R, TM-score 0.68
- 6DDE · Mu opioid receptor-gi protein complex · an experimental structure of the same protein · chain A against R, TM-score 0.68
- 4DKL · Crystal structure of the mu-opioid receptor bound to a morphinan antagonist · an experimental structure of the same protein · chain A against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42866
- Elsewhere: UniProt P42866 · AlphaFold DB P42866
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