Research workbench
AlphaFold monomer V2.0 prediction for acyl-COA:ACYL-CoA alkyltransferase (Q8PDX2)
Analyse AlphaFold monomer V2.0 prediction for acyl-COA:ACYL-CoA alkyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8PDX2
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Acyl-COA:ACYL-CoA alkyltransferase
- UniProt
- Q8PDX2
- Pockets
- 1 · best druggability 0.76
Structure
1 distinct chain · 45% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acyl-COA:ACYL-CoA alkyltransferase | protein | 338 | 45% helix, 25% strand | Q8PDX2 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 479 | 0.76 | 0.85 | 70 | empty |
Compared structures
- 3S20 · Crystal structure of cerulenin bound xanthomonas campestri olea (soak) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3S20 · Crystal structure of cerulenin bound Xanthomonas campestri OleA (soak) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU3 · Crystal Structure of C143S Xanthomonas Campestris OleA bound with myristic acid and… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU3 · Crystal structure of C143S xanthomonas campestris olea bound with myristic acid and… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU2 · Crystal structure C143A from xanthomonas campestris bound with myristoyl-CoA · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU2 · Crystal Structure C143A from Xanthomonas campestris Bound with Myristoyl-CoA · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU5 · Crystal Structures of C143S Xanthomonas campestris OleA with Bound Lauric Acid and… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KU5 · Crystal structures of C143S xanthomonas campestris olea with bound lauric acid and… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KTM · Crystal Structure of C143S Xanthomonas campestris OleA · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KTM · Crystal structure of C143S xanthomonas campestris olea · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4KTI · Crystal Structure of C143A Xathomonas campestris OleA · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 4KTI · Crystal structure of C143A xathomonas campestris olea · an experimental structure of the same protein · chain A against B, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PDX2
- Elsewhere: UniProt Q8PDX2 · AlphaFold DB Q8PDX2
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