Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 6 (O78757)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O78757
- Type
- protein
- Length
- 175 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x99b776DEB2a7E235736ca77F71997f7A305AC803
- Molecule
- NADH-ubiquinone oxidoreductase chain 6
- UniProt
- O78757
- Pockets
- 1 · best druggability 0.54
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 6 | protein | 175 | 70% helix, 0% strand | O78757 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 289 | 0.54 | 0.75 | 33 | empty |
Compared structures
- 7ZEB · Complex I from Ovis aries at pH9, Closed state · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 6ZKK · Complex I inhibited by rote , closed · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 6ZKK · Complex I inhibited by rotenone, closed · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 6ZKO · Native complex I, closed · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 6ZKO · Native complex I, closed · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 7ZDH · Complex I from Ovis aries at pH7.4, Closed state · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 7ZDM · Complex I from Ovis aries at pH5.5, Closed state · an experimental structure of the same protein · chain A against J, TM-score 0.90
- 6ZKB · Membrane domain of closed complex I during turnover · an experimental structure of the same protein · chain A against J, TM-score 0.89
- 6ZKB · Membrane domain of closed complex I during turnover · an experimental structure of the same protein · chain A against J, TM-score 0.89
- 6ZKC · Complex I during turnover, closed · an experimental structure of the same protein · chain A against J, TM-score 0.89
- 6ZKC · Complex I during turnover, closed · an experimental structure of the same protein · chain A against J, TM-score 0.89
- 6ZKG · Complex I with NADH, closed · an experimental structure of the same protein · chain A against J, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O78757
- Elsewhere: UniProt O78757 · AlphaFold DB O78757
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