Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 6 (O79882)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O79882
- Type
- protein
- Length
- 175 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- NADH-ubiquinone oxidoreductase chain 6
- UniProt
- O79882
- Pockets
- 1 · best druggability 0.46
Structure
1 distinct chain · 71% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 6 | protein | 175 | 71% helix, 3% strand | O79882 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 169 | 0.46 | 0.75 | 23 | empty |
Compared structures
- 8UES · In-situ complex I, Deactive class01 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEP · In-situ complex I, Active-Q10 (State-alpha) · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEW · In-situ complex I, Deactive class05 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEX · In-situ complex I, Deactive class06 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UER · In-situ complex I with Q10 (State-gamma) · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UET · In-situ complex I, Deactive class02 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEU · In-situ complex I, Deactive class03 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEV · In-situ complex I, Deactive class04 · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UEZ · In-situ complex I, Active-Q10 (State-delta) · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UD1 · High resolution in-situ structure of complex I in respiratory supercomplex (composite) · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UGJ · In-situ structure of typeB supercomplex in respiratory chain (composite) · an experimental structure of the same protein · chain A against 1J, TM-score 0.97
- 8UGN · In-situ structure of typeO supercomplex in respiratory chain (composite) · an experimental structure of the same protein · chain A against 5J, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O79882
- Elsewhere: UniProt O79882 · AlphaFold DB O79882
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