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AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V subunit 12 (Q9FLM8)

Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q9FLM8
Type
protein
Length
51 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x10Ca0D170A4d6Ed403dE210bA450Baa44a3258bF
Molecule
DNA-directed RNA polymerases II, IV and V subunit 12
UniProt
Q9FLM8

Structure

1 distinct chain · 0% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA-directed RNA polymerases II, IV and V subunit 12protein510% helix, 20% strandQ9FLM8

Compared structures

  • 8HYJ · A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.70
  • 7EU1 · The cryo-EM structure of a. thaliana pol IV-RDR2 holoenzyme · an experimental structure of the same protein · chain A against L, TM-score 0.66
  • 7EU1 · The cryo-EM structure of A. thaliana Pol IV-RDR2 holoenzyme · an experimental structure of the same protein · chain A against L, TM-score 0.66
  • 8XMC · Post-translocated Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.65
  • 7EU0 · The cryo-EM structure of A. thaliana Pol IV-RDR2 backtracked complex · an experimental structure of the same protein · chain A against L, TM-score 0.65
  • 7EU0 · The cryo-EM structure of a. thaliana pol IV-RDR2 backtracked complex · an experimental structure of the same protein · chain A against L, TM-score 0.65
  • 8XMD · Pre-translocated Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.64
  • 8XMB · NTP-bound Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.64
  • 8XME · Backtracked Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.63

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