Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V subunit 10 (Q8LFJ6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerases II, IV and V… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8LFJ6
- Type
- protein
- Length
- 71 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x580890Ad7223575Fa6a09B1Cb6e9c24B282055f0
- Molecule
- DNA-directed RNA polymerases II, IV and V subunit 10
- UniProt
- Q8LFJ6
Structure
1 distinct chain · 44% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerases II, IV and V subunit 10 | protein | 71 | 44% helix, 3% strand | Q8LFJ6 |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 8HYJ · A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex · an experimental structure of the same protein · chain A against J, TM-score 0.84
- 7EU0 · The cryo-EM structure of a. thaliana pol IV-RDR2 backtracked complex · an experimental structure of the same protein · chain A against J, TM-score 0.84
- 7EU0 · The cryo-EM structure of A. thaliana Pol IV-RDR2 backtracked complex · an experimental structure of the same protein · chain A against J, TM-score 0.84
- 8XMC · Post-translocated Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against J, TM-score 0.84
- 8XMB · NTP-bound Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against J, TM-score 0.83
- 8XME · Backtracked Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against J, TM-score 0.83
- 8XMD · Pre-translocated Pol IV transcription elongation complex · an experimental structure of the same protein · chain A against J, TM-score 0.83
- 7EU1 · The cryo-EM structure of A. thaliana Pol IV-RDR2 holoenzyme · an experimental structure of the same protein · chain A against J, TM-score 0.83
- 7EU1 · The cryo-EM structure of a. thaliana pol IV-RDR2 holoenzyme · an experimental structure of the same protein · chain A against J, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8LFJ6
- Elsewhere: UniProt Q8LFJ6 · AlphaFold DB Q8LFJ6
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