Research workbench
AlphaFold monomer V2.0 prediction for NAP1-related protein 1 (Q9CA59)
Analyse AlphaFold monomer V2.0 prediction for NAP1-related protein 1 (Q9CA59) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CA59
- Type
- protein
- Length
- 256 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCb401f8eaBf68E8414EA024E2c64eaF424A02547
- Molecule
- NAP1-related protein 1
- UniProt
- Q9CA59
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 46% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAP1-related protein 1 | protein | 256 | 46% helix, 12% strand | Q9CA59 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 136 | 0.48 | 0.78 | 22 | empty |
| 2 | 70 | 0.33 | 0.75 | 18 | empty |
| 3 | 52 | 0.32 | 0.77 | 17 | empty |
Compared structures
- 5DAY · The structure of NAP1-Related Protein(NRP1) in Arabidopsis · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 5DAY · The structure of NAP1-related PROTEIN(NRP1) in arabidopsis · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 7C7X · Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) · an experimental structure of the same protein · chain A against E, TM-score 0.64
- 7C7X · Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) · an experimental structure of the same protein · chain A against E, TM-score 0.64
- 7BP6 · Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) · an experimental structure of the same protein · chain A against A, TM-score 0.03
- 7BP6 · Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) · an experimental structure of the same protein · chain A against A, TM-score 0.03
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CA59
- Elsewhere: UniProt Q9CA59 · AlphaFold DB Q9CA59
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