MolNFT v1 · #174238 · protein
Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1)
7BP6 · Histone H2A.6: “Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1)”. X-ray diffraction. MolNFT v1 #174238 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BP6
- Type
- protein
- Length
- 186 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histone H2A.6; Histone H2B.1; NRP1-ctad
- UniProt
- Q9LD28, Q9LQQ4, Q9CA59
Structure
x-ray diffraction · 3 distinct chains · 69% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | Histone H2A.6 | protein | 89 | 63% helix, 4% strand | Q9LD28 |
| D | Histone H2B.1 | protein | 90 | 78% helix, 6% strand | Q9LQQ4 |
| A | NRP1-ctad | protein | 7 | 43% helix, 14% strand | Q9CA59 |
Interfaces
3 interfaces between chains.
- C–D · 2490 Ų buried · 19 hydrogen bonds · protein-protein
- D–A · 273 Ų buried · 3 hydrogen bonds · protein-protein
- C–A · 101 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 7BP6 · Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) · the same entry in another collection · chain C against C, TM-score 1.00
- Q9LQQ4 · AlphaFold monomer V2.0 prediction for histone H2B.1 (Q9LQQ4) · a predicted model of the same protein · chain D against A, TM-score 0.98
- Q9LD28 · AlphaFold monomer V2.0 prediction for histone H2A.6 (Q9LD28) · a predicted model of the same protein · chain C against A, TM-score 0.96
- Q9CA59 · AlphaFold monomer V2.0 prediction for NAP1-related protein 1 (Q9CA59) · a predicted model of the same protein · chain A against A, TM-score 0.61
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LD28
- Every structure of UniProt Q9LQQ4
- Every structure of UniProt Q9CA59
- Elsewhere: RCSB PDB 7BP6 · PDBe 7BP6 · UniProt Q9LD28 · UniProt Q9LQQ4 · UniProt Q9CA59
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