UniProt Q9LD28
Histone H2A.6 (Q9LD28)
Histone H2A.6 (UniProt Q9LD28): 10 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 37 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9LD28
- Protein
- Histone H2A.6
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 37 · 5 records with a druggable one
Structures
11 records of Q9LD28 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7BP2 | Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) | x-ray diffraction | A, C | SO4 | 4 (best 0.63) |
| 7BP2 | Structural mechanism directing nucleosome reorganization by NAP1- related protein 1 (NRP1) | x-ray diffraction | A, C | SO4 | — |
| 7BP4 | Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) | x-ray diffraction | G, A | — | 2 (best 0.63) |
| 7BP4 | Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) | x-ray diffraction | G, A | — | — |
| 7BP5 | Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) | x-ray diffraction | A | — | — |
| 7BP6 | Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) | x-ray diffraction | C | — | — |
| 7C7X | Structural insights into nucleosome reorganization by NAP1-related protein 1 (NRP1) | x-ray diffraction | C, A | — | — |
| 8WH5 | Structure of DDM1-nucleosome complex in the apo state | electron microscopy | C, G | — | 10 (best 0.77) |
| 8WH9 | Structure of DDM1-nucleosome complex in ADP-BeFx state | electron microscopy | C, G | — | 9 (best 0.76) |
| 8WHB | Structure of nucleosome core particle of Arabidopsis thaliana | electron microscopy | C, G | — | 12 (best 0.77) |
| Q9LD28 | AlphaFold monomer V2.0 prediction for histone H2A.6 (Q9LD28) | predicted | A | — | — |
Ligands
- SO4 · Sulfate ion · in 2 records
Experiment against prediction
- 8WHB chain C against the predicted model Q9LD28: TM-score 0.97, RMSD 0.64 Å
- 8WHB chain G against the predicted model Q9LD28: TM-score 0.97, RMSD 0.65 Å
- 8WH9 chain C against the predicted model Q9LD28: TM-score 0.97, RMSD 0.75 Å
- 7BP6 chain C against the predicted model Q9LD28: TM-score 0.96, RMSD 0.89 Å
- 8WH9 chain G against the predicted model Q9LD28: TM-score 0.96, RMSD 0.78 Å
- 7BP5 chain A against the predicted model Q9LD28: TM-score 0.96, RMSD 0.87 Å
- 7BP2 chain A against the predicted model Q9LD28: TM-score 0.95, RMSD 0.93 Å
- 7BP2 chain A against the predicted model Q9LD28: TM-score 0.95, RMSD 0.93 Å
- 8WH5 chain G against the predicted model Q9LD28: TM-score 0.95, RMSD 0.84 Å
- 7BP2 chain C against the predicted model Q9LD28: TM-score 0.95, RMSD 1.02 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.