Research workbench
AlphaFold monomer V2.0 prediction for nitrophorin-7 (Q6PQK2)
Analyse AlphaFold monomer V2.0 prediction for nitrophorin-7 (Q6PQK2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6PQK2
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc179FcAd565352aef7349a1598def4650f5E59C5
- Molecule
- Nitrophorin-7
- UniProt
- Q6PQK2
- Pockets
- 2 · best druggability 0.66
Structure
1 distinct chain · 12% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nitrophorin-7 | protein | 205 | 12% helix, 41% strand | Q6PQK2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 326 | 0.66 | 0.80 | 38 | empty |
| 2 | 86 | 0.36 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 4XMH · Crystal structure of nitrophorin 7 from rhodnius prolixus at pH 7.8 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 4XMH · Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 5M6J · Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 5M6J · Crystal structure of nitrophorin 7 E27V mutant from rhodnius prolixus · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 5M6K · Crystal structure of nitrophorin 7 E27V mutant from rhodnius prolixus with imidazole · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 5M6K · Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus with imidazole · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XMF · Crystal structure of nitrophorin 7 from rhodnius prolixus at pH 7.8 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XMF · Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XMC · Crystal structure of nitrophorin 7 from rhodnius prolixus at pH 5.8 · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XMC · Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 5.8 · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XME · Crystal structure of nitrophorin 7 from rhodnius prolixus at pH 7.8 complexed with no · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 4XME · Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with NO · an experimental structure of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6PQK2
- Elsewhere: UniProt Q6PQK2 · AlphaFold DB Q6PQK2
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