Research workbench
AlphaFold monomer V2.0 prediction for SODIUM/HYDROGEN exchanger 7 (Q9LKW9)
Analyse AlphaFold monomer V2.0 prediction for SODIUM/HYDROGEN exchanger 7 (Q9LKW9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LKW9
- Type
- protein
- Length
- 1,146 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- SODIUM/HYDROGEN exchanger 7
- UniProt
- Q9LKW9
- Pockets
- 15 · best druggability 0.75
Structure
1 distinct chain · 57% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SODIUM/HYDROGEN exchanger 7 | protein | 1146 | 57% helix, 6% strand | Q9LKW9 |
Pockets
15 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 786 | 0.75 | 0.79 | 74 | empty |
| 2 | 544 | 0.73 | 0.81 | 48 | empty |
| 3 | 593 | 0.69 | 0.78 | 54 | empty |
| 4 | 519 | 0.68 | 0.79 | 45 | empty |
| 5 | 528 | 0.65 | 0.77 | 39 | empty |
Compared structures
- 8JD9 · Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class1 · an experimental structure of the same protein · chain A against B, TM-score 0.61
- 7Y3E · Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state · an experimental structure of the same protein · chain A against A, TM-score 0.61
- 8HYA · Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state, with expanded TMD · an experimental structure of the same protein · chain A against B, TM-score 0.60
- 8JDA · Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class2 · an experimental structure of the same protein · chain A against B, TM-score 0.36
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LKW9
- Elsewhere: UniProt Q9LKW9 · AlphaFold DB Q9LKW9
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