Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (P52503)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone]… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P52503
- Type
- protein
- Length
- 116 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
- UniProt
- P52503
- Pockets
- 1 · best druggability 0.30
Structure
1 distinct chain · 14% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial | protein | 116 | 14% helix, 16% strand | P52503 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.30 | 0.75 | 15 | empty |
Compared structures
- 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8RGQ · Open Complex I from murine liver · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8PW7 · A respirasome from murine liver · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8RGT · Open Complex I from murine brain · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8RGP · Closed Complex I from murine brain · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8PW5 · CS respirasome from murine liver · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against 7, TM-score 0.81
- 7B93 · Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at… · an experimental structure of the same protein · chain A against R, TM-score 0.80
- 7B93 · Cryo-EM structure of mitochondrial complex I from mus musculus inhibited by iacs-2858 at… · an experimental structure of the same protein · chain A against R, TM-score 0.80
- 8OLT · Mitochondrial complex I from Mus musculus in the active state bound with piericidin A · an experimental structure of the same protein · chain A against R, TM-score 0.80
- 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against R, TM-score 0.80
- 7PSA · The acetogenin-bound complex I of Mus musculus resolved to 3.4 angstroms · an experimental structure of the same protein · chain A against R, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52503
- Elsewhere: UniProt P52503 · AlphaFold DB P52503
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