Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 subunit C2 (Q9CQ54)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CQ54
- Type
- protein
- Length
- 120 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4DFa4212bcA4e8C4A6FaABF30918b7cc4486C3Db
- Molecule
- NADH dehydrogenase [ubiquinone] 1 subunit C2
- UniProt
- Q9CQ54
- Pockets
- 1 · best druggability 0.44
Structure
1 distinct chain · 56% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 subunit C2 | protein | 120 | 56% helix, 0% strand | Q9CQ54 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 92 | 0.44 | 0.79 | 16 | empty |
Compared structures
- 8IBB · Respiratory complex Membrane domain of CI, focus-refined of type IB, Wild type mouse… · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IB9 · Respiratory complex CI:CIII2, type IB, Wild type mouse under cold temperature · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IBD · Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IBF · Respiratory complex Membrane domain of CI, focus-refined of type II, Wild type mouse… · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IAQ · Respiratory complex Membrane domain of CI, focused map of type I, Wild type mouse under… · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IAO · Respiratory complex CI:CIII2, type I, Wild type mouse under thermoneutral temperature · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8IC2 · Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature · an experimental structure of the same protein · chain A against d, TM-score 0.92
- 8IC4 · Respiratory complex Membrane domain of CI, focus-refined of type I, PERK -/- mouse under… · an experimental structure of the same protein · chain A against d, TM-score 0.92
- 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against d, TM-score 0.92
- 8OLT · Mitochondrial complex I from Mus musculus in the active state bound with piericidin A · an experimental structure of the same protein · chain A against d, TM-score 0.92
- 8C2S · Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 1). · an experimental structure of the same protein · chain A against d, TM-score 0.92
- 8CA3 · Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2). · an experimental structure of the same protein · chain A against d, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CQ54
- Elsewhere: UniProt Q9CQ54 · AlphaFold DB Q9CQ54
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