Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q02369)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q02369
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf2CA16F9f8EE37a4C91624cCc30bDf6c3e8E7131
- Molecule
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
- UniProt
- Q02369
- Pockets
- 2 · best druggability 0.63
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | protein | 179 | 55% helix, 0% strand | Q02369 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 330 | 0.63 | 0.79 | 29 | empty |
| 2 | 135 | 0.40 | 0.74 | 18 | empty |
Compared structures
- 7R42 · Bovine complex I in the presence of IM1761092, active class ii (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSK · Bovine complex I in lipid nanodisc, active-Q10 · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSK · Bovine complex I in lipid nanodisc, Active-Q10 · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7R43 · Bovine complex I in the presence of IM1761092, active class iii (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7R44 · Bovine complex I in the presence of IM1761092, active class iv (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSL · Bovine complex I in lipid nanodisc, Active-apo · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSL · Bovine complex I in lipid nanodisc, active-apo · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7R41 · Bovine complex I in the presence of IM1761092, active class i (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7R4C · Bovine complex I in the presence of IM1761092, deactive class v (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7R4F · Bovine complex I in the presence of IM1761092, slack class i (Composite map) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSM · Bovine complex I in lipid nanodisc, Deactive-ligand (composite) · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7QSM · Bovine complex I in lipid nanodisc, deactive-ligand (composite) · an experimental structure of the same protein · chain A against n, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02369
- Elsewhere: UniProt Q02369 · AlphaFold DB Q02369
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