AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (P34943)

Structure

1 distinct chain · 39% helix, 14% strand (DSSP).

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 7QSL · Bovine complex I in lipid nanodisc, active-apo · an experimental structure of the same protein · chain A against P, TM-score 0.90
• 7QSK · Bovine complex I in lipid nanodisc, active-Q10 · an experimental structure of the same protein · chain A against P, TM-score 0.90
• 8Q0A · Inward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM. · an experimental structure of the same protein · chain A against P, TM-score 0.90
• 8Q0M · Outward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM. · an experimental structure of the same protein · chain A against P, TM-score 0.89
• 7R41 · Bovine complex I in the presence of IM1761092, active class i (Composite map) · an experimental structure of the same protein · chain A against P, TM-score 0.89
• 7R43 · Bovine complex I in the presence of IM1761092, active class iii (Composite map) · an experimental structure of the same protein · chain A against P, TM-score 0.89
• 7R44 · Bovine complex I in the presence of IM1761092, active class iv (Composite map) · an experimental structure of the same protein · chain A against P, TM-score 0.89
• 7QSD · Bovine complex I in the active state at 3.1 a · an experimental structure of the same protein · chain A against P, TM-score 0.89
• 8Q4A · Outward-facing, open1 proteoliposome complex I at 2.6 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against P, TM-score 0.88
• 7QSM · Bovine complex I in lipid nanodisc, deactive-ligand (composite) · an experimental structure of the same protein · chain A against P, TM-score 0.88
• 8Q1Y · Outward-facing, open2 proteoliposome complex I at 2.6 A, after deactivation treatment.… · an experimental structure of the same protein · chain A against P, TM-score 0.88
• 8Q1P · Inward-facing, open2 proteoliposome complex I at 2.9 A, after deactivation treatment.… · an experimental structure of the same protein · chain A against P, TM-score 0.87

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P34943
• Elsewhere: UniProt P34943 · AlphaFold DB P34943