Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Q9CPP6)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CPP6
- Type
- protein
- Length
- 116 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
- UniProt
- Q9CPP6
- Pockets
- 2 · best druggability 0.43
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | protein | 116 | 55% helix, 0% strand | Q9CPP6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.43 | 0.83 | 14 | empty |
| 2 | 65 | 0.32 | 0.75 | 14 | empty |
Compared structures
- 7B93 · Cryo-EM structure of mitochondrial complex I from mus musculus inhibited by iacs-2858 at… · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 7B93 · Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at… · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 8RGQ · Open Complex I from murine liver · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against V1, TM-score 0.96
- 8RGT · Open Complex I from murine brain · an experimental structure of the same protein · chain A against V, TM-score 0.96
- 8PW5 · CS respirasome from murine liver · an experimental structure of the same protein · chain A against V1, TM-score 0.96
- 8PW7 · A respirasome from murine liver · an experimental structure of the same protein · chain A against V1, TM-score 0.95
- 6ZTQ · Cryo-EM structure of respiratory complex I from Mus musculus inhibited by piericidin A at… · an experimental structure of the same protein · chain A against V, TM-score 0.95
- 6ZTQ · Cryo-EM structure of respiratory complex I from mus musculus inhibited by piericidin a at… · an experimental structure of the same protein · chain A against V, TM-score 0.95
- 6ZR2 · Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A · an experimental structure of the same protein · chain A against V, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CPP6
- Elsewhere: UniProt Q9CPP6 · AlphaFold DB Q9CPP6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.