Research workbench
AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit M (Q8DLN5)
Analyse AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit M… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DLN5
- Type
- protein
- Length
- 111 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- NAD(P)H-quinone oxidoreductase subunit M
- UniProt
- Q8DLN5
- Pockets
- 1 · best druggability 0.38
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD(P)H-quinone oxidoreductase subunit M | protein | 111 | 33% helix, 26% strand | Q8DLN5 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.38 | 0.79 | 15 | empty |
Compared structures
- 6KHI · Supercomplex for cylic electron transport in cyanobacteria · an experimental structure of the same protein · chain A against M, TM-score 0.94
- 6KHI · Supercomplex for cylic electron transport in cyanobacteria · an experimental structure of the same protein · chain A against M, TM-score 0.94
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6NBY · T.ELONGATUS ndh (composite model) · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6NBY · T.elongatus NDH (composite model) · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6NBQ · T.elongatus NDH (data-set 1) · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6NBQ · T.ELONGATUS ndh (data-set 1) · an experimental structure of the same protein · chain A against M, TM-score 0.93
- 6NBX · T.elongatus NDH (data-set 2) · an experimental structure of the same protein · chain A against M, TM-score 0.92
- 6NBX · T.ELONGATUS ndh (data-set 2) · an experimental structure of the same protein · chain A against M, TM-score 0.92
- 6TJV · Structure of the ndh-1MS complex from thermosynechococcus elongatus · an experimental structure of the same protein · chain A against M, TM-score 0.92
- 6TJV · Structure of the NDH-1MS complex from Thermosynechococcus elongatus · an experimental structure of the same protein · chain A against M, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DLN5
- Elsewhere: UniProt Q8DLN5 · AlphaFold DB Q8DLN5
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