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AlphaFold monomer V2.0 prediction for nascent polypeptide-associated complex subunit alpha (Q13765)

Analyse AlphaFold monomer V2.0 prediction for nascent polypeptide-associated complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q13765
Type
protein
Length
215 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x2d4D3dAab4751429cBCC5Da3908b8aE53fD4899f
Molecule
Nascent polypeptide-associated complex subunit alpha
UniProt
Q13765
Pockets
1 · best druggability 0.40

Structure

1 distinct chain · 29% helix, 13% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANascent polypeptide-associated complex subunit alphaprotein21529% helix, 13% strandQ13765

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11230.400.7522empty

Compared structures

  • 9F1B · Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
  • 9F1D · Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
  • 9F1C · Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
  • 9FQ0 · Human NatA-NAC-MAP1 80S ribosome complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
  • 8P2K · Ternary complex of translating ribosome, NAC and METAP1 · an experimental structure of the same protein · chain A against Na, TM-score 0.30
  • 7QWR · Structure of the ribosome-nascent chain containing an ER signal sequence in complex with… · an experimental structure of the same protein · chain A against t, TM-score 0.30
  • 7QWS · Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC · an experimental structure of the same protein · chain A against t, TM-score 0.30
  • 3MCE · Crystal structure of the NAC domain of alpha subunit of nascent polypeptide-associated… · an experimental structure of the same protein · chain A against B, TM-score 0.26
  • 3MCE · Crystal structure of the nac domain of alpha subunit of nascent polypeptide-associated… · an experimental structure of the same protein · chain A against B, TM-score 0.26

Analyse

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