Research workbench
AlphaFold monomer V2.0 prediction for nascent polypeptide-associated complex subunit alpha (Q13765)
Analyse AlphaFold monomer V2.0 prediction for nascent polypeptide-associated complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q13765
- Type
- protein
- Length
- 215 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2d4D3dAab4751429cBCC5Da3908b8aE53fD4899f
- Molecule
- Nascent polypeptide-associated complex subunit alpha
- UniProt
- Q13765
- Pockets
- 1 · best druggability 0.40
Structure
1 distinct chain · 29% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nascent polypeptide-associated complex subunit alpha | protein | 215 | 29% helix, 13% strand | Q13765 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 123 | 0.40 | 0.75 | 22 | empty |
Compared structures
- 9F1B · Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
- 9F1D · Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
- 9F1C · Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E · an experimental structure of the same protein · chain A against Ct, TM-score 0.33
- 9FQ0 · Human NatA-NAC-MAP1 80S ribosome complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 8P2K · Ternary complex of translating ribosome, NAC and METAP1 · an experimental structure of the same protein · chain A against Na, TM-score 0.30
- 7QWR · Structure of the ribosome-nascent chain containing an ER signal sequence in complex with… · an experimental structure of the same protein · chain A against t, TM-score 0.30
- 7QWS · Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC · an experimental structure of the same protein · chain A against t, TM-score 0.30
- 3MCE · Crystal structure of the NAC domain of alpha subunit of nascent polypeptide-associated… · an experimental structure of the same protein · chain A against B, TM-score 0.26
- 3MCE · Crystal structure of the nac domain of alpha subunit of nascent polypeptide-associated… · an experimental structure of the same protein · chain A against B, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13765
- Elsewhere: UniProt Q13765 · AlphaFold DB Q13765
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