Research workbench
AlphaFold monomer V2.0 prediction for myosin light chain kinase, smooth muscle (P11799)
Analyse AlphaFold monomer V2.0 prediction for myosin light chain kinase, smooth muscle… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P11799
- Type
- protein
- Length
- 1,906 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Myosin light chain kinase, smooth muscle
- UniProt
- P11799
- Pockets
- 14 · best druggability 0.71
Structure
1 distinct chain · 9% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myosin light chain kinase, smooth muscle | protein | 1906 | 9% helix, 34% strand | P11799 |
Pockets
14 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 617 | 0.71 | 0.79 | 62 | empty |
| 2 | 479 | 0.59 | 0.74 | 54 | empty |
| 3 | 204 | 0.45 | 0.73 | 28 | empty |
| 4 | 208 | 0.44 | 0.73 | 25 | empty |
| 5 | 155 | 0.44 | 0.75 | 23 | empty |
Compared structures
- 3O77 · The structure of CA2+ sensor (case-16) · an experimental structure of the same protein · chain A against A, TM-score 0.09
- 3O77 · The structure of Ca2+ Sensor (Case-16) · an experimental structure of the same protein · chain A against A, TM-score 0.09
- 3O78 · The structure of CA2+ sensor (case-12) · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 3O78 · The structure of Ca2+ Sensor (Case-12) · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 3EVU · Crystal structure of Calcium bound dimeric GCAMP2 · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 3EVU · Crystal structure of calcium bound dimeric GCAMP2 · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 1CDL · Target enzyme recognition by calmodulin: 2.4 ångströms structure of a calmodulin-peptide… · an experimental structure of the same protein · chain A against G, TM-score 0.01
- 1CDL · Target enzyme recognition by calmodulin: 2.4 ångströms structure of a calmodulin-peptide… · an experimental structure of the same protein · chain A against G, TM-score 0.01
- 1QTX · The 1.65 ångström structure of calmodulin RS20 peptide complex · an experimental structure of the same protein · chain A against B, TM-score 0.01
- 1QTX · The 1.65 ångström structure of calmodulin RS20 peptide complex · an experimental structure of the same protein · chain A against B, TM-score 0.01
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11799
- Elsewhere: UniProt P11799 · AlphaFold DB P11799
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