Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q9HW02)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HW02
- Type
- protein
- Length
- 480 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q9HW02
- Pockets
- 2 · best druggability 0.76
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 480 | 34% helix, 25% strand | Q9HW02 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 805 | 0.76 | 0.80 | 83 | empty |
| 2 | 161 | 0.59 | 0.83 | 20 | empty |
Compared structures
- 6X9N · Pseudomonas aeruginosa murc with AZ5595 · an experimental structure of the same protein · chain A against H, TM-score 0.57
- 6X9N · Pseudomonas aeruginosa MurC with AZ5595 · an experimental structure of the same protein · chain A against G, TM-score 0.57
- 5VVW · Structure of MurC from Pseudomonas aeruginosa · an experimental structure of the same protein · chain A against D, TM-score 0.57
- 6X9F · Pseudomonas aeruginosa MurC with AZ8074 · an experimental structure of the same protein · chain A against C, TM-score 0.57
- 6X9F · Pseudomonas aeruginosa murc with AZ8074 · an experimental structure of the same protein · chain A against C, TM-score 0.57
- 5VVW · Structure of murc from pseudomonas aeruginosa · an experimental structure of the same protein · chain A against A, TM-score 0.57
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HW02
- Elsewhere: UniProt Q9HW02 · AlphaFold DB Q9HW02
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