Research workbench
AlphaFold monomer V2.0 prediction for methionine synthase reductase (Q9UBK8)
Analyse AlphaFold monomer V2.0 prediction for methionine synthase reductase (Q9UBK8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9UBK8
- Type
- protein
- Length
- 698 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Methionine synthase reductase
- UniProt
- Q9UBK8
- Pockets
- 8 · best druggability 0.76
Structure
1 distinct chain · 32% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine synthase reductase | protein | 698 | 32% helix, 19% strand | Q9UBK8 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 767 | 0.76 | 0.81 | 74 | empty |
| 2 | 342 | 0.69 | 0.82 | 47 | empty |
| 3 | 187 | 0.47 | 0.75 | 32 | empty |
| 4 | 75 | 0.42 | 0.79 | 15 | empty |
| 5 | 113 | 0.39 | 0.75 | 25 | empty |
Compared structures
- 2QTL · Crystal structure of the FAD-containing fnr-like module of human methionine synthase… · an experimental structure of the same protein · chain A against A, TM-score 0.63
- 2QTL · Crystal Structure of the FAD-containing FNR-like Module of Human Methionine Synthase… · an experimental structure of the same protein · chain A against A, TM-score 0.63
- 2QTZ · Crystal Structure of the NADP+-bound FAD-containing FNR-like Module of Human Methionine… · an experimental structure of the same protein · chain A against A, TM-score 0.63
- 2QTZ · Crystal structure of the NADP+-bound FAD-containing fnr-like module of human methionine… · an experimental structure of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UBK8
- Elsewhere: UniProt Q9UBK8 · AlphaFold DB Q9UBK8
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