Research workbench
AlphaFold monomer V2.0 prediction for tetrahydromethanopterin S-methyltransferase subunit a 1 (P80184)
Analyse AlphaFold monomer V2.0 prediction for tetrahydromethanopterin… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P80184
- Type
- protein
- Length
- 238 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2FCae8136DBc761f6F9310fF638e0F8Ad73E2B9d
- Molecule
- Tetrahydromethanopterin S-methyltransferase subunit a 1
- UniProt
- P80184
- Pockets
- 1 · best druggability 0.65
Structure
1 distinct chain · 43% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tetrahydromethanopterin S-methyltransferase subunit a 1 | protein | 238 | 43% helix, 11% strand | P80184 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 114 | 0.65 | 0.89 | 22 | empty |
Compared structures
- 8Q54 · N5-methyl-H4MPT:CoM methyltransferase -coenzyme M complex + CoM · an experimental structure of the same protein · chain A against Q, TM-score 0.20
- 8Q3V · Cryo-EM structure of the methanogenic Na+ translocating N5-methyl-H4MPT:CoM… · an experimental structure of the same protein · chain A against A, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80184
- Elsewhere: UniProt P80184 · AlphaFold DB P80184
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