Research workbench
AlphaFold monomer V2.0 prediction for multiple organellar RNA editing factor 1, mitochondrial (O49429)
Analyse AlphaFold monomer V2.0 prediction for multiple organellar RNA editing factor 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O49429
- Type
- protein
- Length
- 419 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbbF4C29C4CA5f69fa0b37dDd9EcF5f8213FF5778
- Molecule
- Multiple organellar RNA editing factor 1, mitochondrial
- UniProt
- O49429
- Pockets
- 5 · best druggability 0.52
Structure
1 distinct chain · 12% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Multiple organellar RNA editing factor 1, mitochondrial | protein | 419 | 12% helix, 8% strand | O49429 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.52 | 0.80 | 17 | empty |
| 2 | 135 | 0.47 | 0.77 | 15 | empty |
| 3 | 64 | 0.38 | 0.79 | 19 | empty |
| 4 | 76 | 0.34 | 0.75 | 13 | empty |
| 5 | 53 | 0.27 | 0.73 | 12 | empty |
Compared structures
- 5MPW · Crystal structure of Arabidopsis thaliana RNA editing factor MORF1 · an experimental structure of the same protein · chain A against A, TM-score 0.26
- 5MPW · Crystal structure of arabidopsis thaliana RNA editing factor MORF1 · an experimental structure of the same protein · chain A against A, TM-score 0.26
- 5MPX · Crystal structure of arabidopsis thaliana RNA editing factor MORF1, space group P2(1) · an experimental structure of the same protein · chain A against A, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O49429
- Elsewhere: UniProt O49429 · AlphaFold DB O49429
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