AlphaFold monomer V2.0 prediction for mediator of RNA polymerase II transcription subunit 8 (Q96G25)

Structure

1 distinct chain.

Compared structures

• 8GXQ · PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state · an experimental structure of the same protein · chain A against h, TM-score 0.57
• 8GXS · PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state · an experimental structure of the same protein · chain A against h, TM-score 0.57
• 7ENA · TFIID-based PIC-Mediator holo-complex in pre-assembled state (pre-hPIC-MED) · an experimental structure of the same protein · chain A against h, TM-score 0.57
• 7ENC · TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED) · an experimental structure of the same protein · chain A against h, TM-score 0.56
• 7EMF · Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation · an experimental structure of the same protein · chain A against H, TM-score 0.54
• 7EMF · Human mediator (deletion of MED1-idr) in a tail-extended conformation · an experimental structure of the same protein · chain A against H, TM-score 0.54
• 7ENJ · Human Mediator (deletion of MED1-IDR) in a Tail-bent conformation (MED-B) · an experimental structure of the same protein · chain A against H, TM-score 0.54
• 7ENJ · Human mediator (deletion of MED1-idr) in a tail-bent conformation (med-B) · an experimental structure of the same protein · chain A against H, TM-score 0.54
• 8TRH · The IDRc bound human core Mediator complex · an experimental structure of the same protein · chain A against H, TM-score 0.53
• 8TQW · Structure of human transcriptional Mediator complex · an experimental structure of the same protein · chain A against H, TM-score 0.52
• 7LBM · Structure of the human Mediator-bound transcription pre-initiation complex · an experimental structure of the same protein · chain A against h, TM-score 0.47
• 8T9D · CryoEM structure of TR-TRAP · an experimental structure of the same protein · chain A against E, TM-score 0.47

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q96G25
• Elsewhere: UniProt Q96G25 · AlphaFold DB Q96G25