Research workbench
AlphaFold monomer V2.0 prediction for plasmodial-specific protein LAV1-2 (P14725)
Analyse AlphaFold monomer V2.0 prediction for plasmodial-specific protein LAV1-2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P14725
- Type
- protein
- Length
- 355 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Plasmodial-specific protein LAV1-2
- UniProt
- P14725
- Pockets
- 2 · best druggability 0.59
Structure
1 distinct chain · 65% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Plasmodial-specific protein LAV1-2 | protein | 355 | 65% helix, 3% strand | P14725 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 217 | 0.59 | 0.80 | 35 | empty |
| 2 | 239 | 0.53 | 0.76 | 21 | empty |
Compared structures
- 1IJ5 · Metal-free structure of multidomain ef-hand protein, CBP40, from true slime mold · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 1IJ5 · Metal-free structure of multidomain ef-hand protein, CBP40, from true slime mold · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 1IJ6 · CA2+-bound structure of multidomain ef-hand protein, CBP40, from true slime mold · an experimental structure of the same protein · chain A against A, TM-score 0.85
- 1IJ6 · CA2+-bound structure of multidomain ef-hand protein, CBP40, from true slime mold · an experimental structure of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14725
- Elsewhere: UniProt P14725 · AlphaFold DB P14725
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