Research workbench
AlphaFold monomer V2.0 prediction for glucosidase 2 subunit beta (Q9USH8)
Analyse AlphaFold monomer V2.0 prediction for glucosidase 2 subunit beta (Q9USH8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9USH8
- Type
- protein
- Length
- 506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfb0568570325C9C3F26f51e3A07C58ee55079e46
- Molecule
- Glucosidase 2 subunit beta
- UniProt
- Q9USH8
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 44% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucosidase 2 subunit beta | protein | 506 | 44% helix, 14% strand | Q9USH8 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 694 | 0.70 | 0.77 | 47 | empty |
| 2 | 250 | 0.55 | 0.76 | 32 | empty |
| 3 | 82 | 0.40 | 0.78 | 17 | empty |
| 4 | 50 | 0.28 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Compared structures
- 4XQM · Crystal structure of the mrh domain of glucosidase II beta bound to mannose · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 4XQM · Crystal structure of the MRH domain of Glucosidase II beta bound to mannose · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 2LVX · MRH domain of the Glucosidase II beta subunit from S. pombe · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 2LVX · Mrh domain of the glucosidase II beta subunit from S. pombe · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 2N1H · Solution structure of the GBII-beta MRH domain W409A point mutant · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 2N1H · Solution structure of the gbii-beta mrh domain W409A point mutant · an experimental structure of the same protein · chain A against A, TM-score 0.18
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9USH8
- Elsewhere: UniProt Q9USH8 · AlphaFold DB Q9USH8
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