MolNFT v1 · #110242 · protein
Crystal structure of the mrh domain of glucosidase II beta bound to mannose
4XQM · Glucosidase 2 subunit beta: “Crystal structure of the mrh domain of glucosidase II beta bound to mannose”. X-ray diffraction, 1 ligand (MAN). MolNFT v1 #110242 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4XQM
- Type
- protein
- Length
- 94 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glucosidase 2 subunit beta
- EC
- 3.2.1.84
- UniProt
- Q9USH8
- Ligands
- MAN
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 61% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucosidase 2 subunit beta (EC 3.2.1.84) | protein | 94 | 3% helix, 61% strand | Q9USH8 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 4XQM · Crystal structure of the MRH domain of Glucosidase II beta bound to mannose · the same entry in another collection · chain A against A, TM-score 1.00
- Q9USH8 · AlphaFold monomer V2.0 prediction for glucosidase 2 subunit beta (Q9USH8) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9USH8
- Elsewhere: RCSB PDB 4XQM · PDBe 4XQM · UniProt Q9USH8
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