Research workbench
AlphaFold monomer V2.0 prediction for glycine receptor subunit beta (P48167)
Analyse AlphaFold monomer V2.0 prediction for glycine receptor subunit beta (P48167) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P48167
- Type
- protein
- Length
- 497 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Glycine receptor subunit beta
- UniProt
- P48167
- Pockets
- 1 · best druggability 0.45
Structure
1 distinct chain · 36% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine receptor subunit beta | protein | 497 | 36% helix, 22% strand | P48167 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.45 | 0.77 | 25 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 5BKF · Cyro-EM structure of human glycine receptor ALPHA2-beta heteromer, glycine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.66
- 5BKF · Cyro-EM structure of human Glycine Receptor alpha2-beta heteromer, Glycine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.66
- 5BKG · Cyro-EM structure of human glycine receptor ALPHA2-beta heteromer, glycine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.65
- 5BKG · Cyro-EM structure of human Glycine Receptor alpha2-beta heteromer, glycine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.65
- 8DN2 · Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound state… · an experimental structure of the same protein · chain A against E, TM-score 0.65
- 8DN5 · Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound… · an experimental structure of the same protein · chain A against E, TM-score 0.65
- 8DN4 · Cryo-EM structure of human Glycine Receptor alpha-1 beta heteromer, glycine-bound… · an experimental structure of the same protein · chain A against E, TM-score 0.65
- 7KUY · Cyro-EM structure of human Glycine Receptor alpha2-beta heteromer, strychnine bound state · an experimental structure of the same protein · chain A against E, TM-score 0.63
- 7KUY · Cyro-EM structure of human glycine receptor ALPHA2-beta heteromer, strychnine bound state · an experimental structure of the same protein · chain A against E, TM-score 0.63
- 8DN3 · Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, apo state · an experimental structure of the same protein · chain A against E, TM-score 0.63
- 7L31 · Cyro-EM structure of human Glycine Receptor alpha2-beta heteromer, strychnine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.61
- 7L31 · Cyro-EM structure of human glycine receptor ALPHA2-beta heteromer, strychnine bound… · an experimental structure of the same protein · chain A against E, TM-score 0.61
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48167
- Elsewhere: UniProt P48167 · AlphaFold DB P48167
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