UniProt Q9BHM6
Octopine dehydrogenase (Q9BHM6)
Octopine dehydrogenase (UniProt Q9BHM6), EC 1.5.1.11: 8 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 32 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9BHM6
- Protein
- Octopine dehydrogenase
- EC
- 1.5.1.11
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 32 · 9 records with a druggable one
Structures
9 records of Q9BHM6 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3C7A | A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH) | x-ray diffraction | A | NAD | 5 (best 0.70) |
| 3C7A | A structural basis for substrate and stereo selectivity in octopine dehydrogenase (odh-NADH) | x-ray diffraction | A | NAD | 5 (best 0.70) |
| 3C7C | A structural basis for substrate and stereo selectivity in octopine dehydrogenase… | x-ray diffraction | B | NAD, ARG | 4 (best 0.69) |
| 3C7C | A structural basis for substrate and stereo selectivity in octopine dehydrogenase… | x-ray diffraction | B | NAD, ARG | 4 (best 0.69) |
| 3C7D | A structural basis for substrate and stereo selectivity in octopine dehydrogenase… | x-ray diffraction | B | NAD, PYR | 3 (best 0.72) |
| 3C7D | A structural basis for substrate and stereo selectivity in octopine dehydrogenase… | x-ray diffraction | B | NAD, PYR | 3 (best 0.72) |
| 3IQD | Structure of Octopine-dehydrogenase in complex with NADH and Agmatine | x-ray diffraction | B | NAI, AG2 | 3 (best 0.71) |
| 3IQD | Structure of octopine-dehydrogenase in complex with NADH and agmatine | x-ray diffraction | B | NAI, AG2 | 3 (best 0.71) |
| Q9BHM6 | AlphaFold monomer V2.0 prediction for octopine dehydrogenase (Q9BHM6) | predicted | A | — | 2 (best 0.69) |
Ligands
Experiment against prediction
- 3C7C chain B against the predicted model Q9BHM6: TM-score 0.96, RMSD 1.22 Å
- 3C7C chain B against the predicted model Q9BHM6: TM-score 0.96, RMSD 1.22 Å
- 3C7A chain A against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.39 Å
- 3C7A chain A against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.39 Å
- 3IQD chain B against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.45 Å
- 3IQD chain B against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.45 Å
- 3C7D chain B against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.39 Å
- 3C7D chain B against the predicted model Q9BHM6: TM-score 0.95, RMSD 1.39 Å
Elsewhere
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