UniProt Q56228
NADH-quinone oxidoreductase subunit 13 (Q56228)
NADH-quinone oxidoreductase subunit 13 (UniProt Q56228), EC 1.6.5.11, 1.6.5.3: 24 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 55 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q56228
- Protein
- NADH-quinone oxidoreductase subunit 13
- EC
- 1.6.5.11, 1.6.5.3, 7.1.1.-
- Experimental structures
- 24
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 55 · 16 records with a druggable one
Structures
25 records of Q56228 in the MolNFT archive: 24 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4HE8 | Crystal structure of the membrane domain of respiratory complex I from Thermus thermophilus | x-ray diffraction | M, G | UMQ | 11 (best 0.77) |
| 4HE8 | Crystal structure of the membrane domain of respiratory complex I from thermus thermophilus | x-ray diffraction | M, G | UMQ | 11 (best 0.77) |
| 4HEA | Crystal structure of the entire respiratory complex I from Thermus thermophilus | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 4HEA | Crystal structure of the entire respiratory complex I from thermus thermophilus | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 6I0D | Respiratory complex I from Thermus thermophilus with bound Decyl-Ubiqui | x-ray diffraction | M, U | — | 2 (best 0.78) |
| 6I0D | Respiratory complex I from thermus thermophilus with bound decyl- ubiquinone | x-ray diffraction | M, U | — | — |
| 6I1P | Respiratory complex I from Thermus thermophilus with bound NADH | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 6I1P | Respiratory complex I from thermus thermophilus with bound NADH | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 6Q8O | Respiratory complex I from Thermus thermophilus with bound Piericidin A | x-ray diffraction | M, U | — | 2 (best 0.80) |
| 6Q8O | Respiratory complex I from thermus thermophilus with bound piericidin a | x-ray diffraction | M, U | — | — |
| 6Q8W | Respiratory complex I from Thermus thermophilus with bound Aureothin. | x-ray diffraction | M, U | — | 2 (best 0.79) |
| 6Q8W | Respiratory complex I from thermus thermophilus with bound aureothin. | x-ray diffraction | M, U | — | — |
| 6Q8X | Respiratory complex I from Thermus thermophilus with bound Pyridaben. | x-ray diffraction | M, U | — | 2 (best 0.78) |
| 6Q8X | Respiratory complex I from thermus thermophilus with bound pyridaben. | x-ray diffraction | M, U | — | — |
| 6Y11 | Respiratory complex I from Thermus thermophilus | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 6Y11 | Respiratory complex I from thermus thermophilus | x-ray diffraction | M, U | — | 2 (best 0.77) |
| 6ZIY | Respiratory complex I from Thermus thermophilus, NADH dataset, major state | electron microscopy | M | — | 3 (best 0.76) |
| 6ZIY | Respiratory complex I from thermus thermophilus, NADH dataset, major state | electron microscopy | M | — | — |
| 6ZJL | Respiratory complex I from Thermus thermophilus, NAD+ dataset, major state | electron microscopy | M | — | 3 (best 0.78) |
| 6ZJL | Respiratory complex I from thermus thermophilus, NAD+ dataset, major state | electron microscopy | M | — | — |
| 6ZJN | Respiratory complex I from Thermus thermophilus, NADH dataset, minor state | electron microscopy | M | — | 1 (best 0.85) |
| 6ZJN | Respiratory complex I from thermus thermophilus, NADH dataset, minor state | electron microscopy | M | — | — |
| 6ZJY | Respiratory complex I from Thermus thermophilus, NAD+ dataset, minor state | electron microscopy | M | — | 2 (best 0.80) |
| 6ZJY | Respiratory complex I from thermus thermophilus, NAD+ dataset, minor state | electron microscopy | M | — | — |
| Q56228 | AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 13 (Q56228) | predicted | A | — | 4 (best 0.49) |
Ligands
- UMQ · Undecyl-maltoside · in 2 records
Experiment against prediction
- 4HE8 chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.80 Å
- 4HE8 chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.80 Å
- 6I1P chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.92 Å
- 6I1P chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.92 Å
- 6Q8O chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.93 Å
- 6Q8O chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.93 Å
- 6Q8X chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.95 Å
- 6Q8X chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.95 Å
- 6Y11 chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.96 Å
- 6Y11 chain M against the predicted model Q56228: TM-score 0.99, RMSD 0.96 Å
Elsewhere
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