UniProt Q56219
NADH-quinone oxidoreductase subunit 5 (Q56219)
NADH-quinone oxidoreductase subunit 5 (UniProt Q56219): 29 experimental structures and 1 predicted model on GenesisL1, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q56219
- Protein
- NADH-quinone oxidoreductase subunit 5
- Experimental structures
- 29
- Predicted models
- 1
- Pockets
- 1 · 0 records with a druggable one
Structures
30 records of Q56219 in the MolNFT archive: 29 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2FUG | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus | x-ray diffraction | 5, E, N, W | — | — |
| 2FUG | Crystal structure of the hydrophilic domain of respiratory complex I from thermus thermophilus | x-ray diffraction | 5, E, N, W | — | — |
| 2YBB | Fitted model for bovine mitochondrial supercomplex I1III2IV1 by single particle cryo-EM (EMD-1876) | electron microscopy | 5 | — | — |
| 2YBB | Fitted model for bovine mitochondrial supercomplex I1III2IV1 by single particle cryo-EM (emd-1876) | electron microscopy | 5 | — | — |
| 3I9V | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus… | x-ray diffraction | 5, E | — | — |
| 3I9V | Crystal structure of the hydrophilic domain of respiratory complex I from thermus thermophilus… | x-ray diffraction | 5, E | — | — |
| 3IAM | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus… | x-ray diffraction | 5, E | — | — |
| 3IAM | Crystal structure of the hydrophilic domain of respiratory complex I from thermus thermophilus… | x-ray diffraction | 5, E | — | — |
| 3IAS | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus… | x-ray diffraction | 5, E, N, W | — | — |
| 3IAS | Crystal structure of the hydrophilic domain of respiratory complex I from thermus thermophilus… | x-ray diffraction | 5, E, N, W | — | — |
| 3M9S | Crystal structure of respiratory complex I from Thermus thermophilus | x-ray diffraction | 5, E | — | — |
| 3M9S | Crystal structure of respiratory complex I from thermus thermophilus | x-ray diffraction | 5, E | — | — |
| 4HEA | Crystal structure of the entire respiratory complex I from Thermus thermophilus | x-ray diffraction | 5, F | — | — |
| 4HEA | Crystal structure of the entire respiratory complex I from thermus thermophilus | x-ray diffraction | 5, F | — | — |
| 5B3P | Nqo5 of the trypsin-resistant fragment (1-134) in P212121 form | x-ray diffraction | A | — | — |
| 5B3P | NQO5 of the trypsin-resistant fragment (1-134) in P212121 form | x-ray diffraction | A | — | — |
| 5B3Q | NQO5 of the trypsin-resistant fragment (1-134) in P63 form | x-ray diffraction | A | — | — |
| 6I0D | Respiratory complex I from Thermus thermophilus with bound Decyl-Ubiqui | x-ray diffraction | 5, F | — | — |
| 6I0D | Respiratory complex I from thermus thermophilus with bound decyl- ubiquinone | x-ray diffraction | 5, F | — | — |
| 6I1P | Respiratory complex I from Thermus thermophilus with bound NADH | x-ray diffraction | 5, F | — | — |
| 6I1P | Respiratory complex I from thermus thermophilus with bound NADH | x-ray diffraction | 5, F | — | — |
| 6Q8O | Respiratory complex I from thermus thermophilus with bound piericidin a | x-ray diffraction | 5, F | — | — |
| 6Q8W | Respiratory complex I from thermus thermophilus with bound aureothin. | x-ray diffraction | 5, F | — | — |
| 6Q8X | Respiratory complex I from thermus thermophilus with bound pyridaben. | x-ray diffraction | 5, F | — | — |
| 6Y11 | Respiratory complex I from thermus thermophilus | x-ray diffraction | 5, F | — | — |
| 6ZIY | Respiratory complex I from thermus thermophilus, NADH dataset, major state | electron microscopy | 5 | — | — |
| 6ZJL | Respiratory complex I from thermus thermophilus, NAD+ dataset, major state | electron microscopy | 5 | — | — |
| 6ZJN | Respiratory complex I from thermus thermophilus, NADH dataset, minor state | electron microscopy | 5 | — | — |
| 6ZJY | Respiratory complex I from thermus thermophilus, NAD+ dataset, minor state | electron microscopy | 5 | — | — |
| Q56219 | AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 5 (Q56219) | predicted | A | — | 1 (best 0.33) |
Experiment against prediction
- 5B3P chain A against the predicted model Q56219: TM-score 0.98, RMSD 0.91 Å
- 5B3P chain A against the predicted model Q56219: TM-score 0.98, RMSD 0.91 Å
- 5B3Q chain A against the predicted model Q56219: TM-score 0.97, RMSD 0.92 Å
- 6Y11 chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.95 Å
- 2YBB chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.63 Å
- 2YBB chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.63 Å
- 3IAM chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.63 Å
- 3IAM chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.63 Å
- 3M9S chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.62 Å
- 3M9S chain 5 against the predicted model Q56219: TM-score 0.79, RMSD 1.62 Å
Elsewhere
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