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UniProt Q15116

Programmed cell death protein 1 (Q15116)

Programmed cell death protein 1 (UniProt Q15116): 48 experimental structures on GenesisL1, 6 ligands bound, 53 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.

UniProt
Q15116
Protein
Programmed cell death protein 1
Experimental structures
48
Predicted models
0
Ligands
6
Pockets
53 · 7 records with a druggable one

Structures

48 records of Q15116 in the MolNFT archive: 48 experimental, 0 predicted.

EntryTitleMethodChainsLigandsPockets
2M2DHuman programmed cell death 1 receptorsolution nmrA——
2M2DHuman programmed cell death 1 receptorsolution nmrA——
3RRQCrystal structure of the extracellular domain of human PD-1x-ray diffractionA——
3RRQCrystal structure of the extracellular domain of human pd-1x-ray diffractionA——
4ZQKStructure of the complex of human programmed death-1 (PD-1) and its ligand PD-L1.x-ray diffractionB——
4ZQKStructure of the complex of human programmed death-1 (pd-1) and its ligand pd-L1.x-ray diffractionB——
5B8CHigh resolution structure of the human PD-1 in complex with pembrolizumab Fvx-ray diffractionC, F, I, L—11 (best 0.74)
5B8CHigh resolution structure of the human pd-1 in complex with pembrolizumab fvx-ray diffractionC, F, I, L——
5GGRPD-1 in complex with nivolumab Fabx-ray diffractionY, Z—7 (best 0.55)
5GGRPd-1 in complex with nivolumab Fabx-ray diffractionY, Z——
5GGSPD-1 in complex with pembrolizumab Fabx-ray diffractionY, Z—4 (best 0.46)
5GGSPd-1 in complex with pembrolizumab Fabx-ray diffractionY, Z——
5IUSCrystal structure of human PD-L1 in complex with high affinity PD-1 mutantx-ray diffractionA, B——
5IUSCrystal structure of human pd-L1 in complex with high affinity pd-1 mutantx-ray diffractionA, B——
5JXEHuman PD-1 ectodomain complexed with Pembrolizumab Fabx-ray diffractionA, B——
5JXEHuman pd-1 ectodomain complexed with pembrolizumab Fabx-ray diffractionA, B——
5WT9Complex structure of PD-1 and nivolumab-Fabx-ray diffractionGNAG, FUC—
5WT9Complex structure of pd-1 and nivolumab-Fabx-ray diffractionGNAG, FUC—
6HIGHpd-1/NBO1A Fab complexx-ray diffractionB——
6J14Complex structure of gy-14 and pd-1x-ray diffractionG——
6J15Complex structure of GY-5 Fab and PD-1x-ray diffractionC, DNAG, FUC—
6J15Complex structure of gy-5 Fab and pd-1x-ray diffractionC, DNAG, FUC—
6JBTComplex structure of toripalimab-Fab and PD-1x-ray diffractionFNAG, FUC1 (best 0.40)
6JBTComplex structure of toripalimab-Fab and pd-1x-ray diffractionFNAG, FUC—
6JJPCrystal structure of Fab of a pd-1 monoclonal antibody MW11-H317 in complex with pd-1x-ray diffractionC, FNAG, FUC—
6K0YStudy of the interactions of a novel monoclonal antibody, mAb059c, with the hPD-1 receptorx-ray diffractionC—2 (best 0.43)
6K0YStudy of the interactions of a novel monoclonal antibody, MAB059C, with the hpd-1 receptorx-ray diffractionC——
6UMTHigh-affinity human pd-1 pd-L2 complexx-ray diffractionAMG—
6UMUHuman apo pd-1 triple mutantx-ray diffractionACL—
6UMVHuman apo PD-1 double mutantx-ray diffractionACL—
6UMVHuman apo pd-1 double mutantx-ray diffractionACL—
6XKRStructure of sasanlimab Fab in complex with pd-1x-ray diffractionP——
7BXACrystal structure of pd-1 in complex with tislelizumab Fabx-ray diffractionA, P——
7CGWComplex structure of PD-1 and tislelizumab Fabx-ray diffractionC, PNAG5 (best 0.54)
7CGWComplex structure of pd-1 and tislelizumab Fab———
7CU5N-glycosylation of pd-1 and glycosylation dependent binding of pd-1 specific monoclonal antibody…x-ray diffractionE, QNAG, MAN, FUC—
7E9BStructural basis of HLX10 PD-1 receptor recognition, a promising anti-PD-1 antibody clinical…x-ray diffractionC——
7E9BStructural basis of HLX10 pd-1 receptor recognition, a promising anti- pd-1 antibody clinical…x-ray diffractionC——
7VUXComplex structure of PD1 and 609A-Fabx-ray diffractionATHR, MG4 (best 0.52)
7VUXComplex structure of PD1 and 609A-Fabx-ray diffractionAMG—
7WSLPD-1 in complex with Dostarlimabx-ray diffractionD—2 (best 0.43)
7WSLPd-1 in complex with dostarlimabx-ray diffractionD——
7WVMThe complex structure of PD-1 and cemiplimabx-ray diffractionE, F—5 (best 0.71)
7WVMThe complex structure of pd-1 and cemiplimabx-ray diffractionE, F——
8EQ6PD1 signaling receptor bound to FAB Complexx-ray diffractionA—2 (best 0.55)
8GY5High-resolution structure of the cemiplimab Fab in complex with PD-1x-ray diffractionQ, P—8 (best 0.57)
8U32Crystal structure of PD-1 in complex with a Fabx-ray diffractionA, DNAG2 (best 0.41)
Q15116AlphaFold monomer V2.0 prediction for programmed cell death protein 1 (Q15116)———

Ligands

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 10 records
  • FUC · alpha-L-fucopyranose · in 8 records
  • CL · Chloride ion · in 3 records
  • MG · Magnesium ion · in 3 records
  • MAN · alpha-D-mannopyranose · in 1 record
  • THR · Threonine · in 1 record

Elsewhere

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