UniProt Q08174
Protocadherin-1 (Q08174)
Protocadherin-1 (UniProt Q08174): 8 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q08174
- Protein
- Protocadherin-1
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 4 · 0 records with a druggable one
Structures
9 records of Q08174 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6BX7 | Crystal Structure of Human Protocadherin-1 EC1-4 | x-ray diffraction | A | CA | 1 (best 0.41) |
| 6BX7 | Crystal structure of human protocadherin-1 EC1-4 | x-ray diffraction | A | CA | — |
| 6MGA | Crystal Structure of Human Protocadherin-1 EC1-4 with glycosylation | x-ray diffraction | A | NAG, MAN, CA | — |
| 6MGA | Crystal structure of human protocadherin-1 EC1-4 with glycosylation | x-ray diffraction | A | NAG, MAN, CA | — |
| 6PIM | Crystal Structure of Human Protocadherin-1 EC3-4 | x-ray diffraction | A | CA | — |
| 6PIM | Crystal structure of human protocadherin-1 EC3-4 | x-ray diffraction | A | CA | — |
| 6VFP | Crystal structure of human protocadherin 1 EC1-EC4 | x-ray diffraction | A | NAG, CA | 1 (best 0.41) |
| 6VFP | Crystal structure of human protocadherin 1 EC1-EC4 | x-ray diffraction | A | NAG, CA | — |
| Q08174 | AlphaFold monomer V2.0 prediction for protocadherin-1 (Q08174) | predicted | A | — | 2 (best 0.47) |
Ligands
Experiment against prediction
- 6PIM chain A against the predicted model Q08174: TM-score 0.97, RMSD 0.95 Å
- 6PIM chain A against the predicted model Q08174: TM-score 0.97, RMSD 0.95 Å
- 6MGA chain A against the predicted model Q08174: TM-score 0.91, RMSD 2.42 Å
- 6MGA chain A against the predicted model Q08174: TM-score 0.91, RMSD 2.42 Å
- 6VFP chain A against the predicted model Q08174: TM-score 0.90, RMSD 2.61 Å
- 6VFP chain A against the predicted model Q08174: TM-score 0.90, RMSD 2.61 Å
- 6BX7 chain A against the predicted model Q08174: TM-score 0.89, RMSD 2.71 Å
- 6BX7 chain A against the predicted model Q08174: TM-score 0.89, RMSD 2.71 Å
Elsewhere
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