UniProt Q06263
Vacuolar protein sorting-associated protein VTA1 (Q06263)
Vacuolar protein sorting-associated protein VTA1 (UniProt Q06263): 14 experimental structures and 1 predicted model on GenesisL1, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q06263
- Protein
- Vacuolar protein sorting-associated protein VTA1
- Experimental structures
- 14
- Predicted models
- 1
- Pockets
- 5 · 1 record with a druggable one
Structures
15 records of Q06263 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2LUH | NMR structure of the Vta1-Vps60 complex | solution nmr | A | — | — |
| 2LUH | NMR structure of the VTA1-VPS60 complex | solution nmr | A | — | — |
| 2RKK | Crystal Structure of S.cerevisiae Vta1 N-terminal domain | x-ray diffraction | A, B | — | — |
| 2RKK | Crystal structure of S.CEREVISIAE VTA1 N-terminal domain | x-ray diffraction | A, B | — | — |
| 2RKL | Crystal Structure of S.cerevisiae Vta1 C-terminal domain | x-ray diffraction | A, B, C, D, E, F | — | — |
| 2RKL | Crystal structure of S.CEREVISIAE VTA1 C-terminal domain | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3MHV | Crystal Structure of Vps4 and Vta1 | x-ray diffraction | A | — | — |
| 3MHV | Crystal structure of VPS4 and VTA1 | x-ray diffraction | A | — | — |
| 5H7P | NMR structure of the Vta1NTD-Did2(176-204) complex | solution nmr | A | — | — |
| 5H7P | NMR structure of the VTA1NTD-DID2(176-204) complex | solution nmr | A | — | — |
| 5UIE | VPS4-VTA1 complex | electron microscopy | H, I, J, K, L, M, N, O, P, Q, R, S | — | — |
| 5XMK | Cryo-EM structure of the ATP-bound VPS4 mutant-E233Q complex with VTA1 (masked) | electron microscopy | G, H, I, J, K, L, M, N | — | — |
| 6AP1 | VPS4P-VTA1P complex with peptide binding to the central pore of VPS4P | electron microscopy | H, I, J, K, L, M, N, O, P, Q, R, S | — | — |
| 6OO2 | VPS4 with cyclic peptide bound in the central pore | electron microscopy | H, I, J, K, L, M, N, O, P, Q, R, S | — | — |
| Q06263 | AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated protein VTA1 (Q06263) | predicted | A | — | 5 (best 0.59) |
Experiment against prediction
- 2RKK chain A against the predicted model Q06263: TM-score 0.96, RMSD 0.96 Å
- 2RKK chain A against the predicted model Q06263: TM-score 0.96, RMSD 0.96 Å
- 6OO2 chain S against the predicted model Q06263: TM-score 0.96, RMSD 0.40 Å
- 5XMK chain H against the predicted model Q06263: TM-score 0.95, RMSD 0.48 Å
- 6OO2 chain H against the predicted model Q06263: TM-score 0.95, RMSD 0.46 Å
- 2RKL chain D against the predicted model Q06263: TM-score 0.95, RMSD 0.51 Å
- 2RKL chain D against the predicted model Q06263: TM-score 0.95, RMSD 0.51 Å
- 5UIE chain K against the predicted model Q06263: TM-score 0.94, RMSD 0.55 Å
- 6AP1 chain H against the predicted model Q06263: TM-score 0.94, RMSD 0.54 Å
- 3MHV chain A against the predicted model Q06263: TM-score 0.94, RMSD 0.54 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.