UniProt P70662
LIM domain-binding protein 1 (P70662)
LIM domain-binding protein 1 (UniProt P70662): 18 experimental structures and 1 predicted model on GenesisL1, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P70662
- Protein
- LIM domain-binding protein 1
- Experimental structures
- 18
- Predicted models
- 1
- Pockets
- 1 · 0 records with a druggable one
Structures
19 records of P70662 in the MolNFT archive: 18 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1J2O | Structure of FLIN2, a complex containing the N-terminal LIM domain of LMO2 and ldb1-LID | solution nmr | A | — | — |
| 1J2O | Structure of FLIN2, a complex containing the N-terminal lim domain of LMO2 and LDB1-lid | solution nmr | A | — | — |
| 1M3V | FLIN4: Fusion of the LIM binding domain of Ldb1 and the N-terminal LIM domain of LMO4 | solution nmr | A | — | — |
| 1M3V | FLIN4: fusion of the lim binding domain of LDB1 and the N-terminal lim domain of LMO4 | solution nmr | A | — | — |
| 1RUT | Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain | x-ray diffraction | X | — | — |
| 1RUT | Complex of LMO4 lim domains 1 and 2 with the LDB1 lid domain | x-ray diffraction | X | — | — |
| 2JTN | NMR Solution Structure of a ldb1-LID:Lhx3-LIM complex | solution nmr | A | — | — |
| 2JTN | NMR solution structure of a LDB1-LID:LHX3-lim complex | solution nmr | A | — | — |
| 2L6Y | haddock model of GATA1NF:Lmo2LIM2-Ldb1LID | solution nmr | B | — | — |
| 2L6Y | Haddock model of GATA1NF:LMO2LIM2-LDB1LID | solution nmr | B | — | — |
| 2L6Z | haddock model of GATA1NF:Lmo2LIM2-Ldb1LID with FOG | solution nmr | C | — | — |
| 2L6Z | Haddock model of GATA1NF:LMO2LIM2-LDB1LID with fog | solution nmr | C | — | — |
| 2LXD | Backbone 1H, 13C, and 15N Chemical Shift Assignments for LMO2(LIM2)-Ldb1(LID) | solution nmr | A | — | — |
| 2LXD | Backbone 1H, 13C, and 15N chemical shift assignments for LMO2(LIM2)- LDB1(LID) | solution nmr | A | — | — |
| 4JCJ | Crystal structure of Isl1 LIM domains with Ldb1 LIM-interaction domain | x-ray diffraction | A, B, C | — | — |
| 4JCJ | Crystal structure of ISL1 lim domains with LDB1 lim-interaction domain | x-ray diffraction | A, B, C | — | — |
| 6PTL | Structure of the self-association domain of the chromatin looping factor LDB1 | x-ray diffraction | A | — | 1 (best 0.41) |
| 6PTL | Structure of the self-association domain of the chromatin looping factor LDB1 | x-ray diffraction | A | — | — |
| P70662 | AlphaFold monomer V2.0 prediction for lim domain-binding protein 1 (P70662) | predicted | A | — | — |
Experiment against prediction
- 6PTL chain A against the predicted model P70662: TM-score 0.99, RMSD 0.48 Å
- 6PTL chain A against the predicted model P70662: TM-score 0.99, RMSD 0.48 Å
- 4JCJ chain C against the predicted model P61372: TM-score 0.88, RMSD 1.93 Å
- 4JCJ chain C against the predicted model P61372: TM-score 0.88, RMSD 1.93 Å
- 4JCJ chain B against the predicted model P61372: TM-score 0.85, RMSD 2.15 Å
- 4JCJ chain B against the predicted model P61372: TM-score 0.85, RMSD 2.15 Å
- 4JCJ chain A against the predicted model P61372: TM-score 0.80, RMSD 2.42 Å
- 4JCJ chain A against the predicted model P61372: TM-score 0.80, RMSD 2.42 Å
- 2JTN chain A against the predicted model P50481: TM-score 0.60, RMSD 2.61 Å
- 2JTN chain A against the predicted model P50481: TM-score 0.60, RMSD 2.61 Å
Elsewhere
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